CDS

Accession Number TCMCG057C60439
gbkey CDS
Protein Id XP_018466901.1
Location join(934..993,1307..1378,1516..1619,1751..1853,1949..2110,2206..>2457)
Gene LOC108838467
GeneID 108838467
Organism Raphanus sativus

Protein

Length 251aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018611399.1
Definition PREDICTED: delta-1-pyrroline-5-carboxylate synthase A-like, partial [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category E
Description P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants
KEGG_TC -
KEGG_Module M00015        [VIEW IN KEGG]
KEGG_Reaction R00239        [VIEW IN KEGG]
R03313        [VIEW IN KEGG]
KEGG_rclass RC00002        [VIEW IN KEGG]
RC00043        [VIEW IN KEGG]
RC00684        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K12657        [VIEW IN KEGG]
EC 1.2.1.41        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
2.7.2.11        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00330        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01230        [VIEW IN KEGG]
map00330        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01230        [VIEW IN KEGG]
GOs GO:0001101        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004350        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006520        [VIEW IN EMBL-EBI]
GO:0006560        [VIEW IN EMBL-EBI]
GO:0006561        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006970        [VIEW IN EMBL-EBI]
GO:0006972        [VIEW IN EMBL-EBI]
GO:0006979        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008652        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009064        [VIEW IN EMBL-EBI]
GO:0009084        [VIEW IN EMBL-EBI]
GO:0009414        [VIEW IN EMBL-EBI]
GO:0009415        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009555        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009651        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016053        [VIEW IN EMBL-EBI]
GO:0016491        [VIEW IN EMBL-EBI]
GO:0016620        [VIEW IN EMBL-EBI]
GO:0016903        [VIEW IN EMBL-EBI]
GO:0017084        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0022622        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042538        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044283        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046394        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048364        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901605        [VIEW IN EMBL-EBI]
GO:1901607        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGGAGCTAGATCGTTCACGCGCTTTCGCTAAAGACGTCAAGCGTATCGTCGTTAAGGTTGGAACCGCTGTTGTAACTGGGAAAGGTGGAAGATTGGCTCTTGGTCGCTTAGGAGCTCTCTGTGAACAGCTTGCGGAATTAAACTCGGATGGATTTGAGGTGATATTGGTGTCATCTGGTGCGGTTGGTCTTGGCCGCCAAAGGCTTCGCTACAGACAGTTAGTCAATAGCAGCTTTGCTGATCTTCAGAAGCCTCAGCATGAACTTGATGGGAAGGCTTGTGCTGGTGTTGGACAAAGCAGTCTCATGGCTTATTATGAGACTATGTTTGACCAGCTTGATGTGACGGCGGCTCAGCTACTGGTGAATGACAGTAGCTTCAGAGACAAGGAGTTCAGGAAGCAACTCAATGAGACAGTCAAGTCCATGCTTGATCTGAGGGTTATTCCTATTTTCAATGAGAATGATGCTATTAGCACCAGAAGAGCTCCTTATCAGGATTCCTCTGGCATCTTTTGGGATAACGACAGCTTAGCTGCTCTATTGGCGCTGGAACTAAAGGCTGATCTTCTGATTCTTCTGAGTGATGTCGAAGGTCTTTACACCGGTCCTCCTAGTGATCCTAACTCAAAGCTGATCCACACATTCATCAAGGAAAAACATCAAGATGAGATCACATTTGGCGACAAGTCAAGACTAGGAAGAGGAGGCATGACTGCTAAAGTGAAAGCTGCAGTGAACGCAGCTTAT
Protein:  
MEELDRSRAFAKDVKRIVVKVGTAVVTGKGGRLALGRLGALCEQLAELNSDGFEVILVSSGAVGLGRQRLRYRQLVNSSFADLQKPQHELDGKACAGVGQSSLMAYYETMFDQLDVTAAQLLVNDSSFRDKEFRKQLNETVKSMLDLRVIPIFNENDAISTRRAPYQDSSGIFWDNDSLAALLALELKADLLILLSDVEGLYTGPPSDPNSKLIHTFIKEKHQDEITFGDKSRLGRGGMTAKVKAAVNAAY